Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Gm6443-201ENSMUST00000203599 874 ntBASIC18.63■□□□□ 0.57
Cln3Q61124 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cln3Q61124 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.63■□□□□ 0.57
Cln3Q61124 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Cln3Q61124 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.63■□□□□ 0.57
Cln3Q61124 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cln3Q61124 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.62■□□□□ 0.57
Cln3Q61124 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.62■□□□□ 0.57
Cln3Q61124 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.62■□□□□ 0.57
Cln3Q61124 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Cln3Q61124 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cln3Q61124 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Cln3Q61124 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Cln3Q61124 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.62■□□□□ 0.57
Cln3Q61124 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cln3Q61124 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cln3Q61124 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cln3Q61124 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cln3Q61124 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.61■□□□□ 0.57
Cln3Q61124 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.61■□□□□ 0.57
Cln3Q61124 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.61■□□□□ 0.57
Cln3Q61124 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cln3Q61124 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cln3Q61124 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.61■□□□□ 0.57
Cln3Q61124 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cln3Q61124 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cln3Q61124 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cln3Q61124 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cln3Q61124 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.6■□□□□ 0.57
Cln3Q61124 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln3Q61124 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln3Q61124 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cln3Q61124 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.6■□□□□ 0.57
Cln3Q61124 Gm44487-201ENSMUST00000205145 325 ntBASIC18.6■□□□□ 0.57
Cln3Q61124 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln3Q61124 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln3Q61124 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln3Q61124 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln3Q61124 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln3Q61124 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.6■□□□□ 0.57
Cln3Q61124 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln3Q61124 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cln3Q61124 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln3Q61124 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cln3Q61124 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln3Q61124 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln3Q61124 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln3Q61124 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln3Q61124 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln3Q61124 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cln3Q61124 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Cln3Q61124 Gm10052-201ENSMUST00000168019 960 ntBASIC18.59■□□□□ 0.57
Cln3Q61124 Gm7729-201ENSMUST00000050143 801 ntBASIC18.59■□□□□ 0.57
Cln3Q61124 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln3Q61124 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln3Q61124 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln3Q61124 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln3Q61124 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Cln3Q61124 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln3Q61124 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln3Q61124 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cln3Q61124 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cln3Q61124 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cln3Q61124 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cln3Q61124 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cln3Q61124 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cln3Q61124 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Cln3Q61124 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cln3Q61124 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.58■□□□□ 0.56
Cln3Q61124 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cln3Q61124 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cln3Q61124 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cln3Q61124 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cln3Q61124 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cln3Q61124 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cln3Q61124 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cln3Q61124 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms