Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.42■□□□□ 0.38
Slc6a4Q60857 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a4Q60857 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Gm37722-201ENSMUST00000193757 208 ntBASIC17.41■□□□□ 0.38
Slc6a4Q60857 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.41■□□□□ 0.38
Slc6a4Q60857 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a4Q60857 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Slc6a4Q60857 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Gm29518-201ENSMUST00000190858 372 ntBASIC17.4■□□□□ 0.38
Slc6a4Q60857 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.4■□□□□ 0.38
Slc6a4Q60857 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.4■□□□□ 0.38
Slc6a4Q60857 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a4Q60857 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Slc6a4Q60857 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.39■□□□□ 0.38
Slc6a4Q60857 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slc6a4Q60857 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slc6a4Q60857 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.39■□□□□ 0.37
Slc6a4Q60857 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a4Q60857 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.38■□□□□ 0.37
Slc6a4Q60857 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.38■□□□□ 0.37
Slc6a4Q60857 Gm17808-201ENSMUST00000200859 894 ntBASIC17.38■□□□□ 0.37
Slc6a4Q60857 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms