Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Prdm1Q60636 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prdm1Q60636 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prdm1Q60636 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prdm1Q60636 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prdm1Q60636 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prdm1Q60636 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.88■□□□□ 0.77
Prdm1Q60636 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prdm1Q60636 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prdm1Q60636 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prdm1Q60636 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Prdm1Q60636 Mir5130-201ENSMUST00000175160 84 ntBASIC19.87■□□□□ 0.77
Prdm1Q60636 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prdm1Q60636 Gm10231-201ENSMUST00000181584 441 ntBASIC19.87■□□□□ 0.77
Prdm1Q60636 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prdm1Q60636 Gm10175-202ENSMUST00000208752 441 ntBASIC19.87■□□□□ 0.77
Prdm1Q60636 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.87■□□□□ 0.77
Prdm1Q60636 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prdm1Q60636 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prdm1Q60636 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.87■□□□□ 0.77
Prdm1Q60636 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prdm1Q60636 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prdm1Q60636 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prdm1Q60636 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prdm1Q60636 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prdm1Q60636 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prdm1Q60636 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prdm1Q60636 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prdm1Q60636 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prdm1Q60636 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prdm1Q60636 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prdm1Q60636 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.86■□□□□ 0.77
Prdm1Q60636 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Prdm1Q60636 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prdm1Q60636 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prdm1Q60636 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prdm1Q60636 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Prdm1Q60636 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prdm1Q60636 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.86■□□□□ 0.77
Prdm1Q60636 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Prdm1Q60636 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
Prdm1Q60636 Gm45058-201ENSMUST00000205810 766 ntBASIC19.85■□□□□ 0.77
Prdm1Q60636 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prdm1Q60636 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prdm1Q60636 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prdm1Q60636 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prdm1Q60636 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.84■□□□□ 0.77
Prdm1Q60636 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.84■□□□□ 0.77
Prdm1Q60636 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prdm1Q60636 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prdm1Q60636 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prdm1Q60636 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Prdm1Q60636 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prdm1Q60636 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Prdm1Q60636 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Prdm1Q60636 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prdm1Q60636 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prdm1Q60636 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.84■□□□□ 0.77
Prdm1Q60636 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.83■□□□□ 0.77
Prdm1Q60636 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Prdm1Q60636 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Prdm1Q60636 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prdm1Q60636 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prdm1Q60636 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prdm1Q60636 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prdm1Q60636 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.83■□□□□ 0.77
Prdm1Q60636 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prdm1Q60636 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Prdm1Q60636 Gm13836-201ENSMUST00000121159 501 ntBASIC19.83■□□□□ 0.77
Prdm1Q60636 Gm16061-201ENSMUST00000122167 857 ntBASIC19.83■□□□□ 0.77
Prdm1Q60636 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prdm1Q60636 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.83■□□□□ 0.77
Prdm1Q60636 Gm10566-201ENSMUST00000086739 996 ntBASIC19.83■□□□□ 0.77
Prdm1Q60636 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.83■□□□□ 0.76
Prdm1Q60636 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Prdm1Q60636 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Prdm1Q60636 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Prdm1Q60636 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prdm1Q60636 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prdm1Q60636 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prdm1Q60636 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.83■□□□□ 0.76
Prdm1Q60636 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Prdm1Q60636 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Prdm1Q60636 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prdm1Q60636 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Prdm1Q60636 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms