Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Shroom1Q5SX79 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Shroom1Q5SX79 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.08■□□□□ 0.49
Shroom1Q5SX79 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Shroom1Q5SX79 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Shroom1Q5SX79 Gm9103-201ENSMUST00000119371 405 ntBASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Gm7284-201ENSMUST00000131667 944 ntBASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shroom1Q5SX79 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Gm11355-201ENSMUST00000121120 306 ntBASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shroom1Q5SX79 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Gm29518-201ENSMUST00000190858 372 ntBASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shroom1Q5SX79 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Gm27741-201ENSMUST00000185060 237 ntBASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Gm27704-201ENSMUST00000185094 107 ntBASIC18.05■□□□□ 0.48
Shroom1Q5SX79 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shroom1Q5SX79 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms