Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav6d-4Q5R1I0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-4Q5R1I0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Trav6d-4Q5R1I0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-4Q5R1I0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-4Q5R1I0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-4Q5R1I0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav6d-4Q5R1I0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-4Q5R1I0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6d-4Q5R1I0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav6d-4Q5R1I0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Gm27000-201ENSMUST00000182943 842 ntBASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-4Q5R1I0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 AA414768-201ENSMUST00000121924 1257 ntBASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Gm10566-201ENSMUST00000086739 996 ntBASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-4Q5R1I0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms