Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm4Q4VBF2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
R3hdm4Q4VBF2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm4Q4VBF2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm4Q4VBF2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm4Q4VBF2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3hdm4Q4VBF2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
R3hdm4Q4VBF2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3hdm4Q4VBF2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3hdm4Q4VBF2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3hdm4Q4VBF2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
R3hdm4Q4VBF2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
R3hdm4Q4VBF2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
R3hdm4Q4VBF2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.33■□□□□ 0.52
R3hdm4Q4VBF2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.33■□□□□ 0.52
R3hdm4Q4VBF2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.33■□□□□ 0.52
R3hdm4Q4VBF2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
R3hdm4Q4VBF2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
R3hdm4Q4VBF2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
R3hdm4Q4VBF2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
R3hdm4Q4VBF2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
R3hdm4Q4VBF2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Gm13836-201ENSMUST00000121159 501 ntBASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Gm7213-201ENSMUST00000215977 950 ntBASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
R3hdm4Q4VBF2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Gm13474-201ENSMUST00000122466 815 ntBASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.31■□□□□ 0.52
R3hdm4Q4VBF2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
R3hdm4Q4VBF2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.29■□□□□ 0.52
R3hdm4Q4VBF2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3hdm4Q4VBF2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
R3hdm4Q4VBF2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3hdm4Q4VBF2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.29■□□□□ 0.52
R3hdm4Q4VBF2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.29■□□□□ 0.52
R3hdm4Q4VBF2 Gm18032-201ENSMUST00000222541 538 ntBASIC18.29■□□□□ 0.52
R3hdm4Q4VBF2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3hdm4Q4VBF2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3hdm4Q4VBF2 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.29■□□□□ 0.52
R3hdm4Q4VBF2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
R3hdm4Q4VBF2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 Actl10-202ENSMUST00000226583 1501 ntBASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3hdm4Q4VBF2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms