Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC29.64■■■□□ 2.34
Pds5bQ4VA53 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC29.64■■■□□ 2.34
Pds5bQ4VA53 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Pds5bQ4VA53 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Pds5bQ4VA53 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Pds5bQ4VA53 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Pds5bQ4VA53 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
Pds5bQ4VA53 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Pds5bQ4VA53 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pds5bQ4VA53 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Pds5bQ4VA53 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pds5bQ4VA53 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pds5bQ4VA53 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC29.63■■■□□ 2.33
Pds5bQ4VA53 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pds5bQ4VA53 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pds5bQ4VA53 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
Pds5bQ4VA53 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pds5bQ4VA53 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC29.62■■■□□ 2.33
Pds5bQ4VA53 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Pds5bQ4VA53 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Pds5bQ4VA53 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Pds5bQ4VA53 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Pds5bQ4VA53 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Pds5bQ4VA53 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Pds5bQ4VA53 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Pds5bQ4VA53 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Pds5bQ4VA53 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Pds5bQ4VA53 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Pds5bQ4VA53 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Pds5bQ4VA53 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Pds5bQ4VA53 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC29.61■■■□□ 2.33
Pds5bQ4VA53 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Pds5bQ4VA53 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Pds5bQ4VA53 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
Pds5bQ4VA53 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Pds5bQ4VA53 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Pds5bQ4VA53 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC29.61■■■□□ 2.33
Pds5bQ4VA53 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Pds5bQ4VA53 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC29.6■■■□□ 2.33
Pds5bQ4VA53 Gm5253-201ENSMUST00000187104 1025 ntBASIC29.6■■■□□ 2.33
Pds5bQ4VA53 AC124549.3-201ENSMUST00000225541 367 ntBASIC29.6■■■□□ 2.33
Pds5bQ4VA53 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC29.6■■■□□ 2.33
Pds5bQ4VA53 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Pds5bQ4VA53 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Pds5bQ4VA53 Gm11873-201ENSMUST00000117877 1304 ntBASIC29.59■■■□□ 2.33
Pds5bQ4VA53 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC29.59■■■□□ 2.33
Pds5bQ4VA53 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Pds5bQ4VA53 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC29.59■■■□□ 2.33
Pds5bQ4VA53 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC29.59■■■□□ 2.33
Pds5bQ4VA53 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Pds5bQ4VA53 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
Pds5bQ4VA53 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Pds5bQ4VA53 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Pds5bQ4VA53 Gm8349-201ENSMUST00000182720 1003 ntBASIC29.58■■■□□ 2.33
Pds5bQ4VA53 Gm7507-201ENSMUST00000183053 1008 ntBASIC29.58■■■□□ 2.33
Pds5bQ4VA53 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC29.58■■■□□ 2.33
Pds5bQ4VA53 Hsf1-204ENSMUST00000226872 2104 ntBASIC29.58■■■□□ 2.33
Pds5bQ4VA53 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
Pds5bQ4VA53 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Pds5bQ4VA53 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Pds5bQ4VA53 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Pds5bQ4VA53 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Pds5bQ4VA53 Gm5837-201ENSMUST00000191844 1369 ntBASIC29.58■■■□□ 2.33
Pds5bQ4VA53 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
Pds5bQ4VA53 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Pds5bQ4VA53 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
Pds5bQ4VA53 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Pds5bQ4VA53 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC29.57■■■□□ 2.32
Pds5bQ4VA53 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC29.57■■■□□ 2.32
Pds5bQ4VA53 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
Pds5bQ4VA53 Gm13616-201ENSMUST00000120600 222 ntBASIC29.57■■■□□ 2.32
Pds5bQ4VA53 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC29.57■■■□□ 2.32
Pds5bQ4VA53 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Pds5bQ4VA53 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Pds5bQ4VA53 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Pds5bQ4VA53 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Pds5bQ4VA53 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Pds5bQ4VA53 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC29.56■■■□□ 2.32
Pds5bQ4VA53 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Pds5bQ4VA53 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Pds5bQ4VA53 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
Pds5bQ4VA53 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Pds5bQ4VA53 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC29.56■■■□□ 2.32
Pds5bQ4VA53 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Pds5bQ4VA53 Hsf1-207ENSMUST00000228371 2102 ntBASIC29.56■■■□□ 2.32
Pds5bQ4VA53 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Pds5bQ4VA53 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Pds5bQ4VA53 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Pds5bQ4VA53 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Pds5bQ4VA53 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC29.55■■■□□ 2.32
Pds5bQ4VA53 Gm7229-201ENSMUST00000214719 1007 ntBASIC29.55■■■□□ 2.32
Pds5bQ4VA53 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Pds5bQ4VA53 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Pds5bQ4VA53 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Pds5bQ4VA53 Golph3-205ENSMUST00000228671 2842 ntBASIC29.55■■■□□ 2.32
Pds5bQ4VA53 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC29.54■■■□□ 2.32
Pds5bQ4VA53 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC29.54■■■□□ 2.32
Pds5bQ4VA53 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC29.54■■■□□ 2.32
Pds5bQ4VA53 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC29.54■■■□□ 2.32
Pds5bQ4VA53 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC29.54■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms