Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.21■□□□□ 0.99
Shank3Q4ACU6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 AC159093.1-201ENSMUST00000227779 380 ntBASIC21.21■□□□□ 0.99
Shank3Q4ACU6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Shank3Q4ACU6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shank3Q4ACU6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shank3Q4ACU6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shank3Q4ACU6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shank3Q4ACU6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shank3Q4ACU6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Shank3Q4ACU6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Shank3Q4ACU6 Gm44430-201ENSMUST00000203376 995 ntBASIC21.19■□□□□ 0.98
Shank3Q4ACU6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC21.19■□□□□ 0.98
Shank3Q4ACU6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Shank3Q4ACU6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shank3Q4ACU6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shank3Q4ACU6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shank3Q4ACU6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Shank3Q4ACU6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shank3Q4ACU6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shank3Q4ACU6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shank3Q4ACU6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shank3Q4ACU6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Shank3Q4ACU6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Shank3Q4ACU6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shank3Q4ACU6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Shank3Q4ACU6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC21.17■□□□□ 0.98
Shank3Q4ACU6 Gm5264-201ENSMUST00000190584 848 ntBASIC21.17■□□□□ 0.98
Shank3Q4ACU6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shank3Q4ACU6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shank3Q4ACU6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shank3Q4ACU6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shank3Q4ACU6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shank3Q4ACU6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Shank3Q4ACU6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shank3Q4ACU6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shank3Q4ACU6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shank3Q4ACU6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC21.16■□□□□ 0.98
Shank3Q4ACU6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Shank3Q4ACU6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC21.16■□□□□ 0.98
Shank3Q4ACU6 Psmb5-202ENSMUST00000227257 622 ntBASIC21.16■□□□□ 0.98
Shank3Q4ACU6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shank3Q4ACU6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shank3Q4ACU6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shank3Q4ACU6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shank3Q4ACU6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shank3Q4ACU6 Gfra2-202ENSMUST00000227633 1480 ntBASIC21.15■□□□□ 0.98
Shank3Q4ACU6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shank3Q4ACU6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC21.15■□□□□ 0.98
Shank3Q4ACU6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Shank3Q4ACU6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC21.15■□□□□ 0.98
Shank3Q4ACU6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Shank3Q4ACU6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Shank3Q4ACU6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shank3Q4ACU6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Shank3Q4ACU6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shank3Q4ACU6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shank3Q4ACU6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shank3Q4ACU6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Shank3Q4ACU6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms