Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap2Q3V1H1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap2Q3V1H1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap2Q3V1H1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap2Q3V1H1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap2Q3V1H1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.5■□□□□ 0.71
Ckap2Q3V1H1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap2Q3V1H1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap2Q3V1H1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap2Q3V1H1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ckap2Q3V1H1 Actl10-202ENSMUST00000226583 1501 ntBASIC19.5■□□□□ 0.71
Ckap2Q3V1H1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap2Q3V1H1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Gm18959-201ENSMUST00000208954 655 ntBASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap2Q3V1H1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ckap2Q3V1H1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ckap2Q3V1H1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.47■□□□□ 0.71
Ckap2Q3V1H1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ckap2Q3V1H1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ckap2Q3V1H1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ckap2Q3V1H1 Gm13186-201ENSMUST00000118031 316 ntBASIC19.47■□□□□ 0.71
Ckap2Q3V1H1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ckap2Q3V1H1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ckap2Q3V1H1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ckap2Q3V1H1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ckap2Q3V1H1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ckap2Q3V1H1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Ckap2Q3V1H1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.46■□□□□ 0.71
Ckap2Q3V1H1 Mir5130-201ENSMUST00000175160 84 ntBASIC19.46■□□□□ 0.71
Ckap2Q3V1H1 Mir1668-201ENSMUST00000184114 107 ntBASIC19.46■□□□□ 0.71
Ckap2Q3V1H1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Ckap2Q3V1H1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ckap2Q3V1H1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ckap2Q3V1H1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ckap2Q3V1H1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ckap2Q3V1H1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ckap2Q3V1H1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ckap2Q3V1H1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ckap2Q3V1H1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ckap2Q3V1H1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Gm7213-201ENSMUST00000215977 950 ntBASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap2Q3V1H1 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ckap2Q3V1H1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms