Protein–RNA interactions for Protein: Q3UX49

C87499, Expressed sequence C87499, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C87499Q3UX49 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
C87499Q3UX49 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
C87499Q3UX49 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C87499Q3UX49 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
C87499Q3UX49 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C87499Q3UX49 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.32■□□□□ 0.68
C87499Q3UX49 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
C87499Q3UX49 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.31■□□□□ 0.68
C87499Q3UX49 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.31■□□□□ 0.68
C87499Q3UX49 Gm11539-201ENSMUST00000119837 557 ntBASIC19.31■□□□□ 0.68
C87499Q3UX49 Gm13436-201ENSMUST00000120418 567 ntBASIC19.31■□□□□ 0.68
C87499Q3UX49 Gm13559-201ENSMUST00000120476 863 ntBASIC19.31■□□□□ 0.68
C87499Q3UX49 Gm7638-201ENSMUST00000121348 967 ntBASIC19.31■□□□□ 0.68
C87499Q3UX49 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.31■□□□□ 0.68
C87499Q3UX49 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.31■□□□□ 0.68
C87499Q3UX49 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.31■□□□□ 0.68
C87499Q3UX49 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
C87499Q3UX49 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
C87499Q3UX49 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.3■□□□□ 0.68
C87499Q3UX49 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C87499Q3UX49 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
C87499Q3UX49 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C87499Q3UX49 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
C87499Q3UX49 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.3■□□□□ 0.68
C87499Q3UX49 Gm27463-201ENSMUST00000183569 57 ntBASIC19.3■□□□□ 0.68
C87499Q3UX49 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.3■□□□□ 0.68
C87499Q3UX49 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C87499Q3UX49 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.3■□□□□ 0.68
C87499Q3UX49 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
C87499Q3UX49 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C87499Q3UX49 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C87499Q3UX49 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.3■□□□□ 0.68
C87499Q3UX49 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.3■□□□□ 0.68
C87499Q3UX49 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C87499Q3UX49 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
C87499Q3UX49 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
C87499Q3UX49 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C87499Q3UX49 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
C87499Q3UX49 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
C87499Q3UX49 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
C87499Q3UX49 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
C87499Q3UX49 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C87499Q3UX49 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C87499Q3UX49 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C87499Q3UX49 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.29■□□□□ 0.68
C87499Q3UX49 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
C87499Q3UX49 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C87499Q3UX49 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C87499Q3UX49 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C87499Q3UX49 Gm7367-201ENSMUST00000057611 492 ntBASIC19.29■□□□□ 0.68
C87499Q3UX49 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
C87499Q3UX49 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
C87499Q3UX49 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C87499Q3UX49 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.29■□□□□ 0.68
C87499Q3UX49 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C87499Q3UX49 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C87499Q3UX49 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
C87499Q3UX49 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Gm17661-201ENSMUST00000170317 270 ntBASIC19.28■□□□□ 0.68
C87499Q3UX49 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
C87499Q3UX49 Gm37025-201ENSMUST00000195159 829 ntBASIC19.28■□□□□ 0.68
C87499Q3UX49 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.28■□□□□ 0.68
C87499Q3UX49 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C87499Q3UX49 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C87499Q3UX49 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C87499Q3UX49 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C87499Q3UX49 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C87499Q3UX49 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.27■□□□□ 0.68
C87499Q3UX49 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.27■□□□□ 0.68
C87499Q3UX49 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C87499Q3UX49 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
C87499Q3UX49 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.27■□□□□ 0.68
C87499Q3UX49 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms