Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Cdkl5Q3UTQ8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkl5Q3UTQ8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkl5Q3UTQ8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkl5Q3UTQ8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cdkl5Q3UTQ8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkl5Q3UTQ8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkl5Q3UTQ8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkl5Q3UTQ8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Gm7791-201ENSMUST00000219066 539 ntBASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl5Q3UTQ8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Gm27463-201ENSMUST00000183569 57 ntBASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl5Q3UTQ8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Cdkl5Q3UTQ8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkl5Q3UTQ8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.67■□□□□ 0.74
Cdkl5Q3UTQ8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.67■□□□□ 0.74
Cdkl5Q3UTQ8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkl5Q3UTQ8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkl5Q3UTQ8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkl5Q3UTQ8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkl5Q3UTQ8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkl5Q3UTQ8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.67■□□□□ 0.74
Cdkl5Q3UTQ8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cdkl5Q3UTQ8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cdkl5Q3UTQ8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkl5Q3UTQ8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Gm18958-201ENSMUST00000174258 762 ntBASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Cdkl5Q3UTQ8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cdkl5Q3UTQ8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkl5Q3UTQ8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Cdkl5Q3UTQ8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkl5Q3UTQ8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms