Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.05□□□□□ -0.16
Znf48Q3US17 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Znf48Q3US17 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Gm3375-201ENSMUST00000203929 796 ntBASIC14.05□□□□□ -0.16
Znf48Q3US17 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.05□□□□□ -0.16
Znf48Q3US17 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.05□□□□□ -0.16
Znf48Q3US17 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.05□□□□□ -0.16
Znf48Q3US17 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Znf48Q3US17 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Znf48Q3US17 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Znf48Q3US17 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Znf48Q3US17 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Znf48Q3US17 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.04□□□□□ -0.16
Znf48Q3US17 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Znf48Q3US17 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.04□□□□□ -0.16
Znf48Q3US17 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Znf48Q3US17 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.04□□□□□ -0.16
Znf48Q3US17 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Znf48Q3US17 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Gm10013-201ENSMUST00000106074 672 ntBASIC14.03□□□□□ -0.16
Znf48Q3US17 Gm15375-201ENSMUST00000119510 849 ntBASIC14.03□□□□□ -0.16
Znf48Q3US17 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Zfp783-201ENSMUST00000095946 670 ntBASIC14.03□□□□□ -0.16
Znf48Q3US17 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.03□□□□□ -0.16
Znf48Q3US17 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Znf48Q3US17 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Znf48Q3US17 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Znf48Q3US17 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Znf48Q3US17 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Znf48Q3US17 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Znf48Q3US17 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Znf48Q3US17 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.02□□□□□ -0.16
Znf48Q3US17 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Znf48Q3US17 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Znf48Q3US17 Gm37292-201ENSMUST00000192062 758 ntBASIC14.02□□□□□ -0.17
Znf48Q3US17 Gm18959-201ENSMUST00000208954 655 ntBASIC14.02□□□□□ -0.17
Znf48Q3US17 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Znf48Q3US17 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Znf48Q3US17 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Znf48Q3US17 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Znf48Q3US17 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Znf48Q3US17 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Znf48Q3US17 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Znf48Q3US17 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.02□□□□□ -0.17
Znf48Q3US17 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Znf48Q3US17 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Znf48Q3US17 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Znf48Q3US17 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Znf48Q3US17 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf48Q3US17 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Znf48Q3US17 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms