Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Zfp560Q3URI6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Gm11539-201ENSMUST00000119837 557 ntBASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Gm13436-201ENSMUST00000120418 567 ntBASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zfp560Q3URI6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zfp560Q3URI6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Zfp560Q3URI6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Zfp560Q3URI6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zfp560Q3URI6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zfp560Q3URI6 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.02■□□□□ 0.32
Zfp560Q3URI6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zfp560Q3URI6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Zfp560Q3URI6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.02■□□□□ 0.32
Zfp560Q3URI6 Gm13559-201ENSMUST00000120476 863 ntBASIC17.02■□□□□ 0.32
Zfp560Q3URI6 Gm43799-201ENSMUST00000201845 579 ntBASIC17.02■□□□□ 0.32
Zfp560Q3URI6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.02■□□□□ 0.32
Zfp560Q3URI6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zfp560Q3URI6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Zfp560Q3URI6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Zfp560Q3URI6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Zfp560Q3URI6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Zfp560Q3URI6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Zfp560Q3URI6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Zfp560Q3URI6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Zfp560Q3URI6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Zfp560Q3URI6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Zfp560Q3URI6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Zfp560Q3URI6 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms