Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lsmem1Q3UQS2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsmem1Q3UQS2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsmem1Q3UQS2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Gm7213-201ENSMUST00000215977 950 ntBASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsmem1Q3UQS2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Lsmem1Q3UQS2 Actl10-202ENSMUST00000226583 1501 ntBASIC17.21■□□□□ 0.34
Lsmem1Q3UQS2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lsmem1Q3UQS2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lsmem1Q3UQS2 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Mir1668-201ENSMUST00000184114 107 ntBASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Mir7071-201ENSMUST00000184847 69 ntBASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Lsmem1Q3UQS2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms