Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Naf1Q3UMQ8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Gm26039-201ENSMUST00000158152 144 ntBASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Gm5587-201ENSMUST00000206270 674 ntBASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Naf1Q3UMQ8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Naf1Q3UMQ8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 Gm25016-201ENSMUST00000158399 131 ntBASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Naf1Q3UMQ8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Naf1Q3UMQ8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Naf1Q3UMQ8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Naf1Q3UMQ8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Naf1Q3UMQ8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Naf1Q3UMQ8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Naf1Q3UMQ8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Gm27000-201ENSMUST00000182943 842 ntBASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Naf1Q3UMQ8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Gm9013-201ENSMUST00000132939 882 ntBASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Naf1Q3UMQ8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Naf1Q3UMQ8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms