Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smcr8Q3UMB5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smcr8Q3UMB5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smcr8Q3UMB5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Smcr8Q3UMB5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Smcr8Q3UMB5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smcr8Q3UMB5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smcr8Q3UMB5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smcr8Q3UMB5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smcr8Q3UMB5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smcr8Q3UMB5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smcr8Q3UMB5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Smcr8Q3UMB5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smcr8Q3UMB5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Gm18958-201ENSMUST00000174258 762 ntBASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smcr8Q3UMB5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Gm5587-201ENSMUST00000206270 674 ntBASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smcr8Q3UMB5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Gm7284-201ENSMUST00000131667 944 ntBASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Gm9013-201ENSMUST00000132939 882 ntBASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Gm10566-201ENSMUST00000086739 996 ntBASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smcr8Q3UMB5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.23■□□□□ 0.51
Smcr8Q3UMB5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smcr8Q3UMB5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms