Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Spg11Q3UHA3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Spg11Q3UHA3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Gm27494-201ENSMUST00000184735 189 ntBASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Gm7506-201ENSMUST00000207758 815 ntBASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Gm13186-201ENSMUST00000118031 316 ntBASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Gm15653-201ENSMUST00000119247 907 ntBASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Spg11Q3UHA3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Gm12428-201ENSMUST00000119844 727 ntBASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Spg11Q3UHA3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.64■□□□□ 0.1
Spg11Q3UHA3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Gm5312-201ENSMUST00000203728 547 ntBASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Spg11Q3UHA3 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.64■□□□□ 0.09
Spg11Q3UHA3 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.64■□□□□ 0.09
Spg11Q3UHA3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Spg11Q3UHA3 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms