Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shcbp1lQ3TTP0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Shcbp1lQ3TTP0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 AA414768-201ENSMUST00000121924 1257 ntBASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Gm27389-201ENSMUST00000183622 195 ntBASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Mir1668-201ENSMUST00000184114 107 ntBASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shcbp1lQ3TTP0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shcbp1lQ3TTP0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shcbp1lQ3TTP0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shcbp1lQ3TTP0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Gm7213-201ENSMUST00000215977 950 ntBASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.1■□□□□ 0.33
Shcbp1lQ3TTP0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms