Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Khdc4Q3TCX3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Khdc4Q3TCX3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Khdc4Q3TCX3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Khdc4Q3TCX3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Khdc4Q3TCX3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.18■□□□□ 0.18
Khdc4Q3TCX3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Khdc4Q3TCX3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.18■□□□□ 0.18
Khdc4Q3TCX3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Khdc4Q3TCX3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.18■□□□□ 0.18
Khdc4Q3TCX3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Khdc4Q3TCX3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Khdc4Q3TCX3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Khdc4Q3TCX3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Khdc4Q3TCX3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Khdc4Q3TCX3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Khdc4Q3TCX3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Gm10418-201ENSMUST00000100943 576 ntBASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Gm22697-201ENSMUST00000175194 63 ntBASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Gm6345-202ENSMUST00000180900 204 ntBASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Gm18101-201ENSMUST00000215769 548 ntBASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Khdc4Q3TCX3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.15■□□□□ 0.18
Khdc4Q3TCX3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.14■□□□□ 0.18
Khdc4Q3TCX3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Khdc4Q3TCX3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Khdc4Q3TCX3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms