Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.74■□□□□ 0.27
Q3KNL4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q3KNL4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Q3KNL4 Gm15039-201ENSMUST00000118914 875 ntBASIC16.74■□□□□ 0.27
Q3KNL4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.74■□□□□ 0.27
Q3KNL4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.74■□□□□ 0.27
Q3KNL4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q3KNL4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q3KNL4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q3KNL4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q3KNL4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.74■□□□□ 0.27
Q3KNL4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.74■□□□□ 0.27
Q3KNL4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q3KNL4 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.74■□□□□ 0.27
Q3KNL4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3KNL4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3KNL4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q3KNL4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q3KNL4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Q3KNL4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q3KNL4 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.73■□□□□ 0.27
Q3KNL4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3KNL4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3KNL4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3KNL4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Q3KNL4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.73■□□□□ 0.27
Q3KNL4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.73■□□□□ 0.27
Q3KNL4 Gm27275-201ENSMUST00000184318 272 ntBASIC16.73■□□□□ 0.27
Q3KNL4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3KNL4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3KNL4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3KNL4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Q3KNL4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Q3KNL4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Q3KNL4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3KNL4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Q3KNL4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Q3KNL4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.72■□□□□ 0.27
Q3KNL4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Q3KNL4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.72■□□□□ 0.27
Q3KNL4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.72■□□□□ 0.27
Q3KNL4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.72■□□□□ 0.27
Q3KNL4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.72■□□□□ 0.27
Q3KNL4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.72■□□□□ 0.27
Q3KNL4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.72■□□□□ 0.27
Q3KNL4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Q3KNL4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Q3KNL4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q3KNL4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.71■□□□□ 0.27
Q3KNL4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Q3KNL4 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.71■□□□□ 0.27
Q3KNL4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Q3KNL4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3KNL4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Q3KNL4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Q3KNL4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q3KNL4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Q3KNL4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q3KNL4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Q3KNL4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q3KNL4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.7■□□□□ 0.26
Q3KNL4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q3KNL4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q3KNL4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q3KNL4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q3KNL4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q3KNL4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q3KNL4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Q3KNL4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.7■□□□□ 0.26
Q3KNL4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Q3KNL4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms