Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim63Q38HM4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.13□□□□□ -0.15
Trim63Q38HM4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim63Q38HM4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Sybu-209ENSMUST00000228639 4113 ntBASIC14.12□□□□□ -0.15
Trim63Q38HM4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim63Q38HM4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.11□□□□□ -0.15
Trim63Q38HM4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.11□□□□□ -0.15
Trim63Q38HM4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Trim63Q38HM4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Etf1-202ENSMUST00000180351 108 ntBASIC14.1□□□□□ -0.15
Trim63Q38HM4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim63Q38HM4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim63Q38HM4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms