Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC9.09□□□□□ -0.96
Ush2AQ2QI47 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.96
Ush2AQ2QI47 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Mir3102-201ENSMUST00000175555 104 ntBASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 AC154572.2-201ENSMUST00000225105 997 ntBASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ush2AQ2QI47 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Gm3928-201ENSMUST00000121141 1307 ntBASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Mir1895-201ENSMUST00000122615 79 ntBASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Ush2AQ2QI47 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Gm8825-201ENSMUST00000182565 998 ntBASIC9.06□□□□□ -0.96
Ush2AQ2QI47 AC127349.1-201ENSMUST00000224590 266 ntBASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Gm44450-201ENSMUST00000199528 114 ntBASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Gm9794-201ENSMUST00000202370 423 ntBASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Ush2AQ2QI47 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms