Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff1Q08423 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff1Q08423 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff1Q08423 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff1Q08423 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tff1Q08423 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tff1Q08423 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.15□□□□□ -0.14
Tff1Q08423 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tff1Q08423 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff1Q08423 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.15□□□□□ -0.14
Tff1Q08423 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff1Q08423 Gm18666-201ENSMUST00000190039 958 ntBASIC14.15□□□□□ -0.14
Tff1Q08423 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.15□□□□□ -0.14
Tff1Q08423 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.15□□□□□ -0.14
Tff1Q08423 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.15□□□□□ -0.14
Tff1Q08423 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff1Q08423 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff1Q08423 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tff1Q08423 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.15□□□□□ -0.15
Tff1Q08423 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tff1Q08423 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.14□□□□□ -0.15
Tff1Q08423 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tff1Q08423 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.14□□□□□ -0.15
Tff1Q08423 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.14□□□□□ -0.15
Tff1Q08423 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tff1Q08423 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.14□□□□□ -0.15
Tff1Q08423 Mir2861-201ENSMUST00000175539 82 ntBASIC14.14□□□□□ -0.15
Tff1Q08423 Mir8112-201ENSMUST00000184382 131 ntBASIC14.14□□□□□ -0.15
Tff1Q08423 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tff1Q08423 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.14□□□□□ -0.15
Tff1Q08423 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tff1Q08423 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.14□□□□□ -0.15
Tff1Q08423 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Tff1Q08423 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff1Q08423 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tff1Q08423 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tff1Q08423 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tff1Q08423 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.13□□□□□ -0.15
Tff1Q08423 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.13□□□□□ -0.15
Tff1Q08423 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Tff1Q08423 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Tff1Q08423 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.13□□□□□ -0.15
Tff1Q08423 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tff1Q08423 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff1Q08423 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tff1Q08423 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tff1Q08423 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.12□□□□□ -0.15
Tff1Q08423 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tff1Q08423 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Gm37055-201ENSMUST00000191866 133 ntBASIC14.12□□□□□ -0.15
Tff1Q08423 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms