Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Nkx2-3P97334 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nkx2-3P97334 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-3P97334 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nkx2-3P97334 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC21.42■■□□□ 1.02
Nkx2-3P97334 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Gm43347-201ENSMUST00000200226 580 ntBASIC21.42■■□□□ 1.02
Nkx2-3P97334 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC21.42■■□□□ 1.02
Nkx2-3P97334 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx2-3P97334 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.42■■□□□ 1.02
Nkx2-3P97334 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Nkx2-3P97334 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nkx2-3P97334 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Nkx2-3P97334 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nkx2-3P97334 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nkx2-3P97334 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.41■■□□□ 1.02
Nkx2-3P97334 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nkx2-3P97334 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.41■■□□□ 1.02
Nkx2-3P97334 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nkx2-3P97334 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx2-3P97334 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.4■■□□□ 1.02
Nkx2-3P97334 Zfp264-201ENSMUST00000208656 1563 ntBASIC21.4■■□□□ 1.02
Nkx2-3P97334 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx2-3P97334 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx2-3P97334 Gm37519-201ENSMUST00000191687 2210 ntBASIC21.4■■□□□ 1.02
Nkx2-3P97334 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx2-3P97334 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx2-3P97334 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx2-3P97334 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC21.4■■□□□ 1.02
Nkx2-3P97334 AC153794.1-201ENSMUST00000169148 126 ntBASIC21.4■■□□□ 1.02
Nkx2-3P97334 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx2-3P97334 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx2-3P97334 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.4■■□□□ 1.02
Nkx2-3P97334 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Nkx2-3P97334 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx2-3P97334 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Nkx2-3P97334 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkx2-3P97334 Gfra2-202ENSMUST00000227633 1480 ntBASIC21.39■■□□□ 1.02
Nkx2-3P97334 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Nkx2-3P97334 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.39■■□□□ 1.02
Nkx2-3P97334 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nkx2-3P97334 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nkx2-3P97334 Gm11452-201ENSMUST00000122376 690 ntBASIC21.39■■□□□ 1.01
Nkx2-3P97334 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Nkx2-3P97334 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nkx2-3P97334 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Nkx2-3P97334 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nkx2-3P97334 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Nkx2-3P97334 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Nkx2-3P97334 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Nkx2-3P97334 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nkx2-3P97334 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Nkx2-3P97334 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nkx2-3P97334 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nkx2-3P97334 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.38■■□□□ 1.01
Nkx2-3P97334 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nkx2-3P97334 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nkx2-3P97334 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nkx2-3P97334 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Nkx2-3P97334 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nkx2-3P97334 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nkx2-3P97334 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nkx2-3P97334 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
Nkx2-3P97334 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Nkx2-3P97334 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nkx2-3P97334 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC21.37■■□□□ 1.01
Nkx2-3P97334 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nkx2-3P97334 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Nkx2-3P97334 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Nkx2-3P97334 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Nkx2-3P97334 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nkx2-3P97334 Gm15372-201ENSMUST00000120729 834 ntBASIC21.37■■□□□ 1.01
Nkx2-3P97334 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms