Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43cP86449 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim43cP86449 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim43cP86449 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43cP86449 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43cP86449 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.5■□□□□ 0.55
Trim43cP86449 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43cP86449 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43cP86449 Gm30025-201ENSMUST00000218555 728 ntBASIC18.5■□□□□ 0.55
Trim43cP86449 Gm7370-201ENSMUST00000219471 767 ntBASIC18.5■□□□□ 0.55
Trim43cP86449 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trim43cP86449 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43cP86449 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.5■□□□□ 0.55
Trim43cP86449 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43cP86449 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43cP86449 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43cP86449 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim43cP86449 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43cP86449 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43cP86449 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Trim43cP86449 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.49■□□□□ 0.55
Trim43cP86449 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43cP86449 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43cP86449 Gm27463-201ENSMUST00000183569 57 ntBASIC18.49■□□□□ 0.55
Trim43cP86449 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.49■□□□□ 0.55
Trim43cP86449 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trim43cP86449 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim43cP86449 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43cP86449 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43cP86449 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43cP86449 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim43cP86449 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim43cP86449 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43cP86449 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43cP86449 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43cP86449 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.48■□□□□ 0.55
Trim43cP86449 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trim43cP86449 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43cP86449 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.48■□□□□ 0.55
Trim43cP86449 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43cP86449 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43cP86449 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43cP86449 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.48■□□□□ 0.55
Trim43cP86449 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43cP86449 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43cP86449 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43cP86449 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43cP86449 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim43cP86449 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.47■□□□□ 0.55
Trim43cP86449 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.47■□□□□ 0.55
Trim43cP86449 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trim43cP86449 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trim43cP86449 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trim43cP86449 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim43cP86449 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.46■□□□□ 0.55
Trim43cP86449 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
Trim43cP86449 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43cP86449 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43cP86449 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43cP86449 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43cP86449 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43cP86449 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43cP86449 Gm15565-201ENSMUST00000118890 427 ntBASIC18.46■□□□□ 0.55
Trim43cP86449 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trim43cP86449 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.46■□□□□ 0.55
Trim43cP86449 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43cP86449 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43cP86449 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim43cP86449 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trim43cP86449 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trim43cP86449 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Trim43cP86449 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim43cP86449 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim43cP86449 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trim43cP86449 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43cP86449 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trim43cP86449 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43cP86449 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43cP86449 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trim43cP86449 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43cP86449 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.45■□□□□ 0.54
Trim43cP86449 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43cP86449 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Trim43cP86449 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim43cP86449 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Trim43cP86449 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms