Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atf1P81269 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atf1P81269 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.72□□□□□ -0.05
Atf1P81269 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atf1P81269 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atf1P81269 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.72□□□□□ -0.05
Atf1P81269 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Atf1P81269 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.72□□□□□ -0.05
Atf1P81269 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atf1P81269 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atf1P81269 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atf1P81269 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf1P81269 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf1P81269 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf1P81269 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Atf1P81269 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.71□□□□□ -0.05
Atf1P81269 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf1P81269 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf1P81269 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Atf1P81269 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Atf1P81269 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.71□□□□□ -0.05
Atf1P81269 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.71□□□□□ -0.05
Atf1P81269 Gm10698-201ENSMUST00000182663 604 ntBASIC14.71□□□□□ -0.05
Atf1P81269 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf1P81269 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Atf1P81269 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.71□□□□□ -0.05
Atf1P81269 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf1P81269 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf1P81269 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Atf1P81269 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.71□□□□□ -0.05
Atf1P81269 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf1P81269 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atf1P81269 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Atf1P81269 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Atf1P81269 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.7□□□□□ -0.06
Atf1P81269 Gm37025-201ENSMUST00000195159 829 ntBASIC14.7□□□□□ -0.06
Atf1P81269 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Atf1P81269 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.7□□□□□ -0.06
Atf1P81269 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atf1P81269 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.69□□□□□ -0.06
Atf1P81269 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.69□□□□□ -0.06
Atf1P81269 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.69□□□□□ -0.06
Atf1P81269 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Atf1P81269 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Atf1P81269 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atf1P81269 Haglr-201ENSMUST00000100000 2085 ntBASIC14.69□□□□□ -0.06
Atf1P81269 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.69□□□□□ -0.06
Atf1P81269 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Atf1P81269 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Atf1P81269 Gm13216-201ENSMUST00000117145 591 ntBASIC14.68□□□□□ -0.06
Atf1P81269 Gm17661-201ENSMUST00000170317 270 ntBASIC14.68□□□□□ -0.06
Atf1P81269 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.68□□□□□ -0.06
Atf1P81269 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Atf1P81269 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf1P81269 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms