Protein–RNA interactions for Protein: P70255

Nfic, Nuclear factor 1 C-type, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NficP70255 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NficP70255 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NficP70255 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NficP70255 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NficP70255 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NficP70255 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NficP70255 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NficP70255 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NficP70255 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NficP70255 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NficP70255 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.78■□□□□ 0.28
NficP70255 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.77■□□□□ 0.28
NficP70255 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NficP70255 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NficP70255 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
NficP70255 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NficP70255 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NficP70255 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
NficP70255 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.77■□□□□ 0.28
NficP70255 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NficP70255 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NficP70255 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NficP70255 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.77■□□□□ 0.28
NficP70255 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NficP70255 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.77■□□□□ 0.27
NficP70255 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NficP70255 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NficP70255 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
NficP70255 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
NficP70255 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NficP70255 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NficP70255 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NficP70255 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.76■□□□□ 0.27
NficP70255 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NficP70255 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NficP70255 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
NficP70255 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NficP70255 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NficP70255 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
NficP70255 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.76■□□□□ 0.27
NficP70255 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NficP70255 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.75■□□□□ 0.27
NficP70255 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
NficP70255 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NficP70255 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NficP70255 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.75■□□□□ 0.27
NficP70255 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.75■□□□□ 0.27
NficP70255 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.75■□□□□ 0.27
NficP70255 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NficP70255 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NficP70255 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NficP70255 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NficP70255 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.74■□□□□ 0.27
NficP70255 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.74■□□□□ 0.27
NficP70255 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NficP70255 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NficP70255 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NficP70255 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NficP70255 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.74■□□□□ 0.27
NficP70255 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NficP70255 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NficP70255 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NficP70255 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NficP70255 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NficP70255 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NficP70255 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NficP70255 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NficP70255 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms