Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.86■□□□□ 0.29
Crnkl1P63154 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Crnkl1P63154 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Crnkl1P63154 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Crnkl1P63154 Gm12933-201ENSMUST00000120203 872 ntBASIC16.86■□□□□ 0.29
Crnkl1P63154 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.86■□□□□ 0.29
Crnkl1P63154 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.86■□□□□ 0.29
Crnkl1P63154 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Crnkl1P63154 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Crnkl1P63154 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Crnkl1P63154 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Crnkl1P63154 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.85■□□□□ 0.29
Crnkl1P63154 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Crnkl1P63154 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.85■□□□□ 0.29
Crnkl1P63154 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Crnkl1P63154 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crnkl1P63154 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crnkl1P63154 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Crnkl1P63154 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crnkl1P63154 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crnkl1P63154 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.84■□□□□ 0.29
Crnkl1P63154 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crnkl1P63154 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crnkl1P63154 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.84■□□□□ 0.29
Crnkl1P63154 Gm6365-201ENSMUST00000054711 744 ntBASIC16.84■□□□□ 0.29
Crnkl1P63154 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crnkl1P63154 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Crnkl1P63154 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.84■□□□□ 0.29
Crnkl1P63154 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Crnkl1P63154 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crnkl1P63154 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crnkl1P63154 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crnkl1P63154 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Crnkl1P63154 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Crnkl1P63154 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Crnkl1P63154 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Crnkl1P63154 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Crnkl1P63154 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crnkl1P63154 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crnkl1P63154 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Crnkl1P63154 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
Crnkl1P63154 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Crnkl1P63154 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Crnkl1P63154 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.83■□□□□ 0.28
Crnkl1P63154 Mir5133-201ENSMUST00000174955 77 ntBASIC16.83■□□□□ 0.28
Crnkl1P63154 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.83■□□□□ 0.28
Crnkl1P63154 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Crnkl1P63154 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crnkl1P63154 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crnkl1P63154 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crnkl1P63154 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Crnkl1P63154 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crnkl1P63154 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Crnkl1P63154 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Crnkl1P63154 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Crnkl1P63154 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Crnkl1P63154 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.83■□□□□ 0.28
Crnkl1P63154 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Crnkl1P63154 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Crnkl1P63154 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Crnkl1P63154 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crnkl1P63154 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crnkl1P63154 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crnkl1P63154 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Crnkl1P63154 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crnkl1P63154 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crnkl1P63154 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crnkl1P63154 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crnkl1P63154 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crnkl1P63154 Gm7290-201ENSMUST00000104990 617 ntBASIC16.82■□□□□ 0.28
Crnkl1P63154 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms