Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.37□□□□□ -0.11
Gabra1P62812 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Gm9988-201ENSMUST00000069786 435 ntBASIC14.37□□□□□ -0.11
Gabra1P62812 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gabra1P62812 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.37□□□□□ -0.11
Gabra1P62812 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.37□□□□□ -0.11
Gabra1P62812 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.36□□□□□ -0.11
Gabra1P62812 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gabra1P62812 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gabra1P62812 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Gabra1P62812 Reep4-203ENSMUST00000226563 1444 ntBASIC14.36□□□□□ -0.11
Gabra1P62812 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Gabra1P62812 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gabra1P62812 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gabra1P62812 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Gabra1P62812 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gabra1P62812 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gabra1P62812 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.35□□□□□ -0.11
Gabra1P62812 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.35□□□□□ -0.11
Gabra1P62812 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.35□□□□□ -0.11
Gabra1P62812 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.35□□□□□ -0.11
Gabra1P62812 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gabra1P62812 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Gabra1P62812 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gabra1P62812 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabra1P62812 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabra1P62812 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gabra1P62812 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gabra1P62812 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabra1P62812 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gabra1P62812 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gabra1P62812 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gabra1P62812 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.34□□□□□ -0.11
Gabra1P62812 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabra1P62812 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Gabra1P62812 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabra1P62812 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabra1P62812 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabra1P62812 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gabra1P62812 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gabra1P62812 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Gabra1P62812 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gabra1P62812 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gabra1P62812 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabra1P62812 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabra1P62812 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabra1P62812 Gm27454-201ENSMUST00000185090 204 ntBASIC14.33□□□□□ -0.12
Gabra1P62812 Gm43017-201ENSMUST00000198296 752 ntBASIC14.33□□□□□ -0.12
Gabra1P62812 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabra1P62812 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabra1P62812 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Gabra1P62812 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Gabra1P62812 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabra1P62812 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.33□□□□□ -0.12
Gabra1P62812 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gabra1P62812 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gabra1P62812 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gabra1P62812 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gabra1P62812 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms