Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SmoP56726 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SmoP56726 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SmoP56726 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SmoP56726 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SmoP56726 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SmoP56726 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SmoP56726 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.1■□□□□ 0.33
SmoP56726 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.1■□□□□ 0.33
SmoP56726 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SmoP56726 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.1■□□□□ 0.33
SmoP56726 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.1■□□□□ 0.33
SmoP56726 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SmoP56726 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.1■□□□□ 0.33
SmoP56726 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.1■□□□□ 0.33
SmoP56726 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SmoP56726 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SmoP56726 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SmoP56726 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SmoP56726 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SmoP56726 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SmoP56726 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SmoP56726 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SmoP56726 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SmoP56726 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.09■□□□□ 0.33
SmoP56726 Gm6345-202ENSMUST00000180900 204 ntBASIC17.09■□□□□ 0.33
SmoP56726 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.09■□□□□ 0.33
SmoP56726 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SmoP56726 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SmoP56726 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.09■□□□□ 0.33
SmoP56726 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SmoP56726 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SmoP56726 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.08■□□□□ 0.33
SmoP56726 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SmoP56726 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SmoP56726 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SmoP56726 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.08■□□□□ 0.32
SmoP56726 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SmoP56726 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.08■□□□□ 0.32
SmoP56726 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SmoP56726 Gm11355-201ENSMUST00000121120 306 ntBASIC17.08■□□□□ 0.32
SmoP56726 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SmoP56726 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SmoP56726 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SmoP56726 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SmoP56726 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SmoP56726 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SmoP56726 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SmoP56726 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SmoP56726 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
SmoP56726 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SmoP56726 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SmoP56726 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SmoP56726 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.07■□□□□ 0.32
SmoP56726 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.07■□□□□ 0.32
SmoP56726 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SmoP56726 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SmoP56726 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SmoP56726 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SmoP56726 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.06■□□□□ 0.32
SmoP56726 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SmoP56726 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SmoP56726 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.06■□□□□ 0.32
SmoP56726 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SmoP56726 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SmoP56726 Gm13186-201ENSMUST00000118031 316 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms