Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp5P56399 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.78■□□□□ 0.76
Usp5P56399 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Usp5P56399 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Usp5P56399 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Usp5P56399 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.78■□□□□ 0.76
Usp5P56399 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Usp5P56399 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.78■□□□□ 0.76
Usp5P56399 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Usp5P56399 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.78■□□□□ 0.76
Usp5P56399 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.78■□□□□ 0.76
Usp5P56399 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp5P56399 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Usp5P56399 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp5P56399 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp5P56399 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp5P56399 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp5P56399 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Usp5P56399 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Usp5P56399 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Usp5P56399 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Usp5P56399 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Usp5P56399 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp5P56399 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp5P56399 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp5P56399 Gm21559-201ENSMUST00000220638 855 ntBASIC19.77■□□□□ 0.76
Usp5P56399 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp5P56399 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp5P56399 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp5P56399 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp5P56399 Gm8587-201ENSMUST00000076538 843 ntBASIC19.77■□□□□ 0.76
Usp5P56399 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Usp5P56399 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp5P56399 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp5P56399 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.77■□□□□ 0.75
Usp5P56399 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp5P56399 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp5P56399 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp5P56399 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp5P56399 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp5P56399 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Usp5P56399 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp5P56399 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp5P56399 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp5P56399 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.76■□□□□ 0.75
Usp5P56399 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.76■□□□□ 0.75
Usp5P56399 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.76■□□□□ 0.75
Usp5P56399 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp5P56399 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Usp5P56399 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Usp5P56399 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp5P56399 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Usp5P56399 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp5P56399 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp5P56399 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.76■□□□□ 0.75
Usp5P56399 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp5P56399 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp5P56399 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp5P56399 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.76■□□□□ 0.75
Usp5P56399 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.76■□□□□ 0.75
Usp5P56399 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Usp5P56399 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 AA414768-201ENSMUST00000121924 1257 ntBASIC19.75■□□□□ 0.75
Usp5P56399 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.75■□□□□ 0.75
Usp5P56399 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Usp5P56399 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.75■□□□□ 0.75
Usp5P56399 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.75■□□□□ 0.75
Usp5P56399 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Usp5P56399 Gm10566-201ENSMUST00000086739 996 ntBASIC19.75■□□□□ 0.75
Usp5P56399 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Usp5P56399 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.75■□□□□ 0.75
Usp5P56399 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp5P56399 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Usp5P56399 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp5P56399 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms