Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nub1P54729 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nub1P54729 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nub1P54729 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.3■□□□□ 0.52
Nub1P54729 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nub1P54729 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.29■□□□□ 0.52
Nub1P54729 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Nub1P54729 Il3ra-202ENSMUST00000223589 738 ntBASIC18.29■□□□□ 0.52
Nub1P54729 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nub1P54729 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Nub1P54729 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nub1P54729 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Nub1P54729 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.28■□□□□ 0.52
Nub1P54729 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Nub1P54729 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.28■□□□□ 0.52
Nub1P54729 Gm11539-201ENSMUST00000119837 557 ntBASIC18.28■□□□□ 0.52
Nub1P54729 Gm13436-201ENSMUST00000120418 567 ntBASIC18.28■□□□□ 0.52
Nub1P54729 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nub1P54729 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.27■□□□□ 0.52
Nub1P54729 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.27■□□□□ 0.52
Nub1P54729 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nub1P54729 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.27■□□□□ 0.52
Nub1P54729 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.27■□□□□ 0.52
Nub1P54729 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nub1P54729 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nub1P54729 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nub1P54729 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Nub1P54729 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nub1P54729 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Nub1P54729 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nub1P54729 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nub1P54729 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nub1P54729 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nub1P54729 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.26■□□□□ 0.51
Nub1P54729 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.26■□□□□ 0.51
Nub1P54729 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.26■□□□□ 0.51
Nub1P54729 Gm27463-201ENSMUST00000183569 57 ntBASIC18.26■□□□□ 0.51
Nub1P54729 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.26■□□□□ 0.51
Nub1P54729 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.26■□□□□ 0.51
Nub1P54729 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nub1P54729 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Nub1P54729 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nub1P54729 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nub1P54729 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nub1P54729 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nub1P54729 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nub1P54729 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nub1P54729 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nub1P54729 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nub1P54729 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nub1P54729 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nub1P54729 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Nub1P54729 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nub1P54729 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.25■□□□□ 0.51
Nub1P54729 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nub1P54729 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Nub1P54729 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms