Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.42■□□□□ 0.22
Lbx1P52955 AV026068-213ENSMUST00000223675 1171 ntBASIC16.42■□□□□ 0.22
Lbx1P52955 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.42■□□□□ 0.22
Lbx1P52955 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lbx1P52955 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lbx1P52955 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lbx1P52955 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lbx1P52955 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lbx1P52955 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lbx1P52955 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Lbx1P52955 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lbx1P52955 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lbx1P52955 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lbx1P52955 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Lbx1P52955 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Lbx1P52955 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lbx1P52955 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.41■□□□□ 0.22
Lbx1P52955 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lbx1P52955 Gm8396-201ENSMUST00000057361 823 ntBASIC16.41■□□□□ 0.22
Lbx1P52955 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lbx1P52955 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lbx1P52955 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lbx1P52955 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lbx1P52955 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lbx1P52955 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.4■□□□□ 0.22
Lbx1P52955 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.4■□□□□ 0.22
Lbx1P52955 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lbx1P52955 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lbx1P52955 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Lbx1P52955 Gm13418-201ENSMUST00000119097 944 ntBASIC16.4■□□□□ 0.22
Lbx1P52955 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lbx1P52955 Gm23547-201ENSMUST00000158210 271 ntBASIC16.4■□□□□ 0.22
Lbx1P52955 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.4■□□□□ 0.22
Lbx1P52955 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lbx1P52955 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lbx1P52955 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lbx1P52955 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Lbx1P52955 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.4■□□□□ 0.22
Lbx1P52955 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lbx1P52955 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lbx1P52955 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lbx1P52955 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lbx1P52955 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lbx1P52955 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Lbx1P52955 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Lbx1P52955 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lbx1P52955 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Lbx1P52955 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Lbx1P52955 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.39■□□□□ 0.21
Lbx1P52955 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lbx1P52955 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lbx1P52955 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Lbx1P52955 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lbx1P52955 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.39■□□□□ 0.21
Lbx1P52955 Gm11336-201ENSMUST00000118168 334 ntBASIC16.39■□□□□ 0.21
Lbx1P52955 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.39■□□□□ 0.21
Lbx1P52955 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lbx1P52955 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.39■□□□□ 0.21
Lbx1P52955 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lbx1P52955 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lbx1P52955 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lbx1P52955 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 Gm13312-201ENSMUST00000119631 718 ntBASIC16.38■□□□□ 0.21
Lbx1P52955 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.38■□□□□ 0.21
Lbx1P52955 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.38■□□□□ 0.21
Lbx1P52955 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Lbx1P52955 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.38■□□□□ 0.21
Lbx1P52955 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Lbx1P52955 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lbx1P52955 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Lbx1P52955 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lbx1P52955 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lbx1P52955 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Lbx1P52955 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lbx1P52955 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Lbx1P52955 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lbx1P52955 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Lbx1P52955 Gm13036-201ENSMUST00000117799 748 ntBASIC16.37■□□□□ 0.21
Lbx1P52955 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.37■□□□□ 0.21
Lbx1P52955 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.37■□□□□ 0.21
Lbx1P52955 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.37■□□□□ 0.21
Lbx1P52955 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.37■□□□□ 0.21
Lbx1P52955 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lbx1P52955 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.37■□□□□ 0.21
Lbx1P52955 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lbx1P52955 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lbx1P52955 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms