Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.11■□□□□ 0.65
Brca1P48754 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Brca1P48754 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Brca1P48754 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.1■□□□□ 0.65
Brca1P48754 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Brca1P48754 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Brca1P48754 Gm15467-201ENSMUST00000120582 445 ntBASIC19.1■□□□□ 0.65
Brca1P48754 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Brca1P48754 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Brca1P48754 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Brca1P48754 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Brca1P48754 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Brca1P48754 Gm2756-201ENSMUST00000195851 400 ntBASIC19.1■□□□□ 0.65
Brca1P48754 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.1■□□□□ 0.65
Brca1P48754 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Brca1P48754 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Brca1P48754 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Brca1P48754 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Brca1P48754 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.09■□□□□ 0.65
Brca1P48754 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 Gm44430-201ENSMUST00000203376 995 ntBASIC19.09■□□□□ 0.65
Brca1P48754 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Brca1P48754 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Brca1P48754 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.08■□□□□ 0.65
Brca1P48754 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Brca1P48754 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Brca1P48754 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Brca1P48754 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Brca1P48754 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Brca1P48754 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Brca1P48754 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Brca1P48754 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.08■□□□□ 0.64
Brca1P48754 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Brca1P48754 Gm7230-201ENSMUST00000173026 815 ntBASIC19.08■□□□□ 0.64
Brca1P48754 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Brca1P48754 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Brca1P48754 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Brca1P48754 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Brca1P48754 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Brca1P48754 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Brca1P48754 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.08■□□□□ 0.64
Brca1P48754 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.08■□□□□ 0.64
Brca1P48754 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Brca1P48754 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Brca1P48754 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.07■□□□□ 0.64
Brca1P48754 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.07■□□□□ 0.64
Brca1P48754 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Brca1P48754 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Brca1P48754 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.07■□□□□ 0.64
Brca1P48754 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.07■□□□□ 0.64
Brca1P48754 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Brca1P48754 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Brca1P48754 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Brca1P48754 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Brca1P48754 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Brca1P48754 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Brca1P48754 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.06■□□□□ 0.64
Brca1P48754 Gm12260-201ENSMUST00000122447 411 ntBASIC19.06■□□□□ 0.64
Brca1P48754 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.06■□□□□ 0.64
Brca1P48754 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.06■□□□□ 0.64
Brca1P48754 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.06■□□□□ 0.64
Brca1P48754 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Brca1P48754 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Brca1P48754 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Brca1P48754 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Brca1P48754 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Brca1P48754 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Brca1P48754 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.06■□□□□ 0.64
Brca1P48754 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Brca1P48754 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Brca1P48754 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms