Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Gm5408-201ENSMUST00000197998 747 ntBASIC14.42□□□□□ -0.1
Hist1h1dP43277 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.42□□□□□ -0.1
Hist1h1dP43277 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.42□□□□□ -0.1
Hist1h1dP43277 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.42□□□□□ -0.1
Hist1h1dP43277 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1dP43277 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hist1h1dP43277 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1dP43277 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1dP43277 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1dP43277 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.39□□□□□ -0.11
Hist1h1dP43277 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Hist1h1dP43277 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.39□□□□□ -0.11
Hist1h1dP43277 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1dP43277 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.39□□□□□ -0.11
Hist1h1dP43277 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.38□□□□□ -0.11
Hist1h1dP43277 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Dio3-201ENSMUST00000097228 1449 ntBASIC14.38□□□□□ -0.11
Hist1h1dP43277 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hist1h1dP43277 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms