Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Timp3P39876 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Timp3P39876 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.93□□□□□ -0.18
Timp3P39876 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp3P39876 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Timp3P39876 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Timp3P39876 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Timp3P39876 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Timp3P39876 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.92□□□□□ -0.18
Timp3P39876 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp3P39876 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.91□□□□□ -0.18
Timp3P39876 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Timp3P39876 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.91□□□□□ -0.18
Timp3P39876 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Timp3P39876 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp3P39876 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp3P39876 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Timp3P39876 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Timp3P39876 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp3P39876 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp3P39876 Gm10013-201ENSMUST00000106074 672 ntBASIC13.91□□□□□ -0.18
Timp3P39876 Gm6659-201ENSMUST00000174752 547 ntBASIC13.91□□□□□ -0.18
Timp3P39876 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.91□□□□□ -0.18
Timp3P39876 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Timp3P39876 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.91□□□□□ -0.18
Timp3P39876 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Timp3P39876 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Timp3P39876 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.91□□□□□ -0.18
Timp3P39876 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Timp3P39876 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp3P39876 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp3P39876 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp3P39876 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp3P39876 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Timp3P39876 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Timp3P39876 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Timp3P39876 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Timp3P39876 Gm24841-201ENSMUST00000158676 357 ntBASIC13.9□□□□□ -0.18
Timp3P39876 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Timp3P39876 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.9□□□□□ -0.18
Timp3P39876 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Timp3P39876 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Timp3P39876 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Timp3P39876 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Timp3P39876 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Timp3P39876 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Timp3P39876 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Timp3P39876 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.89□□□□□ -0.19
Timp3P39876 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.89□□□□□ -0.19
Timp3P39876 Mir5130-201ENSMUST00000175160 84 ntBASIC13.89□□□□□ -0.19
Timp3P39876 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.89□□□□□ -0.19
Timp3P39876 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Timp3P39876 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms