Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.28■□□□□ 0.2
Cdh4P39038 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdh4P39038 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh4P39038 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cdh4P39038 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh4P39038 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh4P39038 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.28■□□□□ 0.2
Cdh4P39038 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh4P39038 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh4P39038 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh4P39038 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh4P39038 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh4P39038 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh4P39038 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh4P39038 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh4P39038 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cdh4P39038 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh4P39038 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh4P39038 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh4P39038 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdh4P39038 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh4P39038 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Cdh4P39038 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cdh4P39038 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh4P39038 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh4P39038 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Cdh4P39038 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh4P39038 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh4P39038 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh4P39038 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.26■□□□□ 0.19
Cdh4P39038 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdh4P39038 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cdh4P39038 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cdh4P39038 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Gm7889-201ENSMUST00000185591 958 ntBASIC16.26■□□□□ 0.19
Cdh4P39038 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh4P39038 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Cdh4P39038 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.25■□□□□ 0.19
Cdh4P39038 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Cdh4P39038 Gm9987-201ENSMUST00000069768 567 ntBASIC16.25■□□□□ 0.19
Cdh4P39038 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.25■□□□□ 0.19
Cdh4P39038 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh4P39038 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.24■□□□□ 0.19
Cdh4P39038 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cdh4P39038 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Cdh4P39038 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cdh4P39038 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Cdh4P39038 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.24■□□□□ 0.19
Cdh4P39038 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cdh4P39038 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh4P39038 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh4P39038 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh4P39038 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cdh4P39038 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cdh4P39038 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cdh4P39038 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cdh4P39038 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cdh4P39038 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh4P39038 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms