Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LdlrP35951 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LdlrP35951 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.93■□□□□ 0.3
LdlrP35951 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LdlrP35951 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LdlrP35951 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.93■□□□□ 0.3
LdlrP35951 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LdlrP35951 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LdlrP35951 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LdlrP35951 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LdlrP35951 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LdlrP35951 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LdlrP35951 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LdlrP35951 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LdlrP35951 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LdlrP35951 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
LdlrP35951 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.93■□□□□ 0.3
LdlrP35951 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
LdlrP35951 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LdlrP35951 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Gm11927-201ENSMUST00000118472 759 ntBASIC16.92■□□□□ 0.3
LdlrP35951 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LdlrP35951 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.92■□□□□ 0.3
LdlrP35951 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.92■□□□□ 0.3
LdlrP35951 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LdlrP35951 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.91■□□□□ 0.3
LdlrP35951 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LdlrP35951 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.91■□□□□ 0.3
LdlrP35951 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.91■□□□□ 0.3
LdlrP35951 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LdlrP35951 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LdlrP35951 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LdlrP35951 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LdlrP35951 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LdlrP35951 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LdlrP35951 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LdlrP35951 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LdlrP35951 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LdlrP35951 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LdlrP35951 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.9■□□□□ 0.3
LdlrP35951 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.9■□□□□ 0.3
LdlrP35951 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LdlrP35951 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
LdlrP35951 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LdlrP35951 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LdlrP35951 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LdlrP35951 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LdlrP35951 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
LdlrP35951 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LdlrP35951 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LdlrP35951 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
LdlrP35951 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LdlrP35951 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
LdlrP35951 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LdlrP35951 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.89■□□□□ 0.29
LdlrP35951 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.89■□□□□ 0.29
LdlrP35951 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LdlrP35951 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.89■□□□□ 0.29
LdlrP35951 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LdlrP35951 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.89■□□□□ 0.29
LdlrP35951 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.89■□□□□ 0.29
LdlrP35951 Mtag2-201ENSMUST00000058665 714 ntBASIC16.89■□□□□ 0.29
LdlrP35951 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LdlrP35951 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LdlrP35951 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LdlrP35951 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.89■□□□□ 0.29
LdlrP35951 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms