Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.4■□□□□ 0.38
Mmp13P33435 Mir6349-201ENSMUST00000184059 97 ntBASIC17.4■□□□□ 0.38
Mmp13P33435 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.4■□□□□ 0.38
Mmp13P33435 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Mmp13P33435 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.39■□□□□ 0.37
Mmp13P33435 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.39■□□□□ 0.37
Mmp13P33435 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Mmp13P33435 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.39■□□□□ 0.37
Mmp13P33435 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.39■□□□□ 0.37
Mmp13P33435 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.39■□□□□ 0.37
Mmp13P33435 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.39■□□□□ 0.37
Mmp13P33435 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Mmp13P33435 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp13P33435 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.38■□□□□ 0.37
Mmp13P33435 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Mmp13P33435 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.38■□□□□ 0.37
Mmp13P33435 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.38■□□□□ 0.37
Mmp13P33435 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp13P33435 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp13P33435 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.38■□□□□ 0.37
Mmp13P33435 Gm18025-201ENSMUST00000221733 862 ntBASIC17.38■□□□□ 0.37
Mmp13P33435 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Mmp13P33435 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.38■□□□□ 0.37
Mmp13P33435 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.38■□□□□ 0.37
Mmp13P33435 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp13P33435 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mmp13P33435 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.37■□□□□ 0.37
Mmp13P33435 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.37■□□□□ 0.37
Mmp13P33435 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.37■□□□□ 0.37
Mmp13P33435 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Gm42545-201ENSMUST00000202755 922 ntBASIC17.37■□□□□ 0.37
Mmp13P33435 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Mmp13P33435 Gm10252-201ENSMUST00000209541 832 ntBASIC17.37■□□□□ 0.37
Mmp13P33435 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Mmp13P33435 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.37■□□□□ 0.37
Mmp13P33435 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.37■□□□□ 0.37
Mmp13P33435 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Mmp13P33435 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mmp13P33435 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms