Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp13P33435 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.4■□□□□ 0.38
Mmp13P33435 Mir6349-201ENSMUST00000184059 97 ntBASIC17.4■□□□□ 0.38
Mmp13P33435 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.4■□□□□ 0.38
Mmp13P33435 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp13P33435 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Mmp13P33435 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.39■□□□□ 0.37
Mmp13P33435 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.39■□□□□ 0.37
Mmp13P33435 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Mmp13P33435 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.39■□□□□ 0.37
Mmp13P33435 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.39■□□□□ 0.37
Mmp13P33435 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.39■□□□□ 0.37
Mmp13P33435 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.39■□□□□ 0.37
Mmp13P33435 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp13P33435 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Mmp13P33435 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp13P33435 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.38■□□□□ 0.37
Mmp13P33435 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Mmp13P33435 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.38■□□□□ 0.37
Mmp13P33435 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.38■□□□□ 0.37
Mmp13P33435 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp13P33435 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp13P33435 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.38■□□□□ 0.37
Mmp13P33435 Gm18025-201ENSMUST00000221733 862 ntBASIC17.38■□□□□ 0.37
Mmp13P33435 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Mmp13P33435 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.38■□□□□ 0.37
Mmp13P33435 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.38■□□□□ 0.37
Mmp13P33435 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp13P33435 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp13P33435 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mmp13P33435 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.37■□□□□ 0.37
Mmp13P33435 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.37■□□□□ 0.37
Mmp13P33435 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.37■□□□□ 0.37
Mmp13P33435 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Gm42545-201ENSMUST00000202755 922 ntBASIC17.37■□□□□ 0.37
Mmp13P33435 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Mmp13P33435 Gm10252-201ENSMUST00000209541 832 ntBASIC17.37■□□□□ 0.37
Mmp13P33435 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Mmp13P33435 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.37■□□□□ 0.37
Mmp13P33435 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.37■□□□□ 0.37
Mmp13P33435 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Mmp13P33435 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mmp13P33435 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp13P33435 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms