Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PdgfbP31240 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfbP31240 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfbP31240 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfbP31240 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.02■□□□□ 0.32
PdgfbP31240 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PdgfbP31240 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PdgfbP31240 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfbP31240 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.02■□□□□ 0.32
PdgfbP31240 Gm18421-201ENSMUST00000204122 625 ntBASIC17.02■□□□□ 0.32
PdgfbP31240 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfbP31240 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.02■□□□□ 0.32
PdgfbP31240 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
PdgfbP31240 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfbP31240 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PdgfbP31240 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfbP31240 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PdgfbP31240 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PdgfbP31240 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PdgfbP31240 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PdgfbP31240 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
PdgfbP31240 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PdgfbP31240 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PdgfbP31240 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.02■□□□□ 0.31
PdgfbP31240 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.02■□□□□ 0.31
PdgfbP31240 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfbP31240 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfbP31240 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfbP31240 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PdgfbP31240 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfbP31240 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfbP31240 Gm29707-201ENSMUST00000196325 491 ntBASIC17.01■□□□□ 0.31
PdgfbP31240 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.01■□□□□ 0.31
PdgfbP31240 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfbP31240 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfbP31240 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PdgfbP31240 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PdgfbP31240 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PdgfbP31240 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfbP31240 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfbP31240 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PdgfbP31240 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfbP31240 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PdgfbP31240 Grk6-206ENSMUST00000224995 2971 ntBASIC17.01■□□□□ 0.31
PdgfbP31240 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.01■□□□□ 0.31
PdgfbP31240 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PdgfbP31240 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17■□□□□ 0.31
PdgfbP31240 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17■□□□□ 0.31
PdgfbP31240 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17■□□□□ 0.31
PdgfbP31240 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PdgfbP31240 Gm15467-201ENSMUST00000120582 445 ntBASIC17■□□□□ 0.31
PdgfbP31240 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17■□□□□ 0.31
PdgfbP31240 Gm6736-201ENSMUST00000166583 948 ntBASIC17■□□□□ 0.31
PdgfbP31240 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17■□□□□ 0.31
PdgfbP31240 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17■□□□□ 0.31
PdgfbP31240 CT943659.1-201ENSMUST00000215459 326 ntBASIC17■□□□□ 0.31
PdgfbP31240 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 Gm35558-201ENSMUST00000222675 2219 ntBASIC17■□□□□ 0.31
PdgfbP31240 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PdgfbP31240 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17■□□□□ 0.31
PdgfbP31240 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.99■□□□□ 0.31
PdgfbP31240 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PdgfbP31240 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PdgfbP31240 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 Gm23935-201ENSMUST00000102303 57 ntBASIC16.99■□□□□ 0.31
PdgfbP31240 Gm24270-201ENSMUST00000102326 57 ntBASIC16.99■□□□□ 0.31
PdgfbP31240 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.99■□□□□ 0.31
PdgfbP31240 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PdgfbP31240 Gm24245-201ENSMUST00000157318 57 ntBASIC16.99■□□□□ 0.31
PdgfbP31240 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PdgfbP31240 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.99■□□□□ 0.31
PdgfbP31240 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.99■□□□□ 0.31
PdgfbP31240 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.99■□□□□ 0.31
PdgfbP31240 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PdgfbP31240 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms