Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.83■□□□□ 0.12
Nedd8P29595 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nedd8P29595 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nedd8P29595 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nedd8P29595 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.82■□□□□ 0.12
Nedd8P29595 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nedd8P29595 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.82■□□□□ 0.12
Nedd8P29595 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.82■□□□□ 0.12
Nedd8P29595 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.82■□□□□ 0.12
Nedd8P29595 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nedd8P29595 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nedd8P29595 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Nedd8P29595 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nedd8P29595 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nedd8P29595 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.82■□□□□ 0.12
Nedd8P29595 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nedd8P29595 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nedd8P29595 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nedd8P29595 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nedd8P29595 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nedd8P29595 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nedd8P29595 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Nedd8P29595 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Nedd8P29595 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nedd8P29595 Mir8112-201ENSMUST00000184382 131 ntBASIC15.81■□□□□ 0.12
Nedd8P29595 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.81■□□□□ 0.12
Nedd8P29595 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nedd8P29595 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nedd8P29595 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nedd8P29595 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nedd8P29595 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nedd8P29595 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Nedd8P29595 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Nedd8P29595 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Nedd8P29595 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nedd8P29595 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nedd8P29595 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nedd8P29595 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nedd8P29595 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Nedd8P29595 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
Nedd8P29595 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Nedd8P29595 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nedd8P29595 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nedd8P29595 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nedd8P29595 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.8■□□□□ 0.12
Nedd8P29595 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nedd8P29595 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nedd8P29595 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nedd8P29595 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nedd8P29595 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.79■□□□□ 0.12
Nedd8P29595 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nedd8P29595 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.79■□□□□ 0.12
Nedd8P29595 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.79■□□□□ 0.12
Nedd8P29595 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nedd8P29595 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nedd8P29595 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nedd8P29595 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nedd8P29595 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nedd8P29595 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Nedd8P29595 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.78■□□□□ 0.12
Nedd8P29595 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nedd8P29595 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms