Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Mir5133-201ENSMUST00000174955 77 ntBASIC17.11■□□□□ 0.33
RxrbP28704 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RxrbP28704 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RxrbP28704 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.11■□□□□ 0.33
RxrbP28704 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RxrbP28704 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RxrbP28704 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RxrbP28704 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RxrbP28704 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RxrbP28704 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RxrbP28704 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RxrbP28704 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RxrbP28704 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.1■□□□□ 0.33
RxrbP28704 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RxrbP28704 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.1■□□□□ 0.33
RxrbP28704 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.1■□□□□ 0.33
RxrbP28704 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
RxrbP28704 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Gm26524-201ENSMUST00000192339 390 ntBASIC17.1■□□□□ 0.33
RxrbP28704 Rab3c-203ENSMUST00000224180 967 ntBASIC17.1■□□□□ 0.33
RxrbP28704 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RxrbP28704 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.1■□□□□ 0.33
RxrbP28704 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RxrbP28704 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
RxrbP28704 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.09■□□□□ 0.33
RxrbP28704 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Gm12933-201ENSMUST00000120203 872 ntBASIC17.09■□□□□ 0.33
RxrbP28704 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RxrbP28704 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.09■□□□□ 0.33
RxrbP28704 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RxrbP28704 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.09■□□□□ 0.33
RxrbP28704 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RxrbP28704 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RxrbP28704 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RxrbP28704 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RxrbP28704 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RxrbP28704 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RxrbP28704 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.08■□□□□ 0.33
RxrbP28704 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RxrbP28704 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RxrbP28704 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RxrbP28704 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RxrbP28704 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RxrbP28704 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RxrbP28704 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RxrbP28704 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RxrbP28704 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.08■□□□□ 0.32
RxrbP28704 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RxrbP28704 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RxrbP28704 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RxrbP28704 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RxrbP28704 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RxrbP28704 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RxrbP28704 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RxrbP28704 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RxrbP28704 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RxrbP28704 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RxrbP28704 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RxrbP28704 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RxrbP28704 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.07■□□□□ 0.32
RxrbP28704 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.07■□□□□ 0.32
RxrbP28704 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RxrbP28704 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RxrbP28704 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.07■□□□□ 0.32
RxrbP28704 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RxrbP28704 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RxrbP28704 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RxrbP28704 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RxrbP28704 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RxrbP28704 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RxrbP28704 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RxrbP28704 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RxrbP28704 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms