Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.2□□□□□ -0.14
Col8a2P25318 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col8a2P25318 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.2□□□□□ -0.14
Col8a2P25318 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.2□□□□□ -0.14
Col8a2P25318 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Col8a2P25318 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.2□□□□□ -0.14
Col8a2P25318 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col8a2P25318 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col8a2P25318 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.19□□□□□ -0.14
Col8a2P25318 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.19□□□□□ -0.14
Col8a2P25318 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.19□□□□□ -0.14
Col8a2P25318 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col8a2P25318 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col8a2P25318 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Gm18958-201ENSMUST00000174258 762 ntBASIC14.19□□□□□ -0.14
Col8a2P25318 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col8a2P25318 Gm18101-201ENSMUST00000215769 548 ntBASIC14.19□□□□□ -0.14
Col8a2P25318 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.19□□□□□ -0.14
Col8a2P25318 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col8a2P25318 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.18□□□□□ -0.14
Col8a2P25318 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.18□□□□□ -0.14
Col8a2P25318 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col8a2P25318 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.18□□□□□ -0.14
Col8a2P25318 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col8a2P25318 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.18□□□□□ -0.14
Col8a2P25318 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.18□□□□□ -0.14
Col8a2P25318 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col8a2P25318 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col8a2P25318 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Actl10-202ENSMUST00000226583 1501 ntBASIC14.18□□□□□ -0.14
Col8a2P25318 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.18□□□□□ -0.14
Col8a2P25318 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col8a2P25318 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col8a2P25318 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col8a2P25318 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col8a2P25318 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col8a2P25318 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col8a2P25318 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col8a2P25318 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col8a2P25318 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col8a2P25318 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col8a2P25318 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Col8a2P25318 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.17□□□□□ -0.14
Col8a2P25318 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col8a2P25318 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col8a2P25318 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col8a2P25318 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col8a2P25318 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col8a2P25318 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col8a2P25318 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col8a2P25318 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.17□□□□□ -0.14
Col8a2P25318 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms