Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
BdnfP21237 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.3■□□□□ 0.2
BdnfP21237 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BdnfP21237 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BdnfP21237 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
BdnfP21237 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BdnfP21237 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.29■□□□□ 0.2
BdnfP21237 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.29■□□□□ 0.2
BdnfP21237 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.29■□□□□ 0.2
BdnfP21237 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BdnfP21237 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BdnfP21237 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
BdnfP21237 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BdnfP21237 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
BdnfP21237 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BdnfP21237 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
BdnfP21237 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BdnfP21237 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.29■□□□□ 0.2
BdnfP21237 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.29■□□□□ 0.2
BdnfP21237 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
BdnfP21237 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BdnfP21237 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BdnfP21237 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BdnfP21237 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BdnfP21237 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BdnfP21237 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BdnfP21237 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
BdnfP21237 Gm15375-201ENSMUST00000119510 849 ntBASIC16.28■□□□□ 0.2
BdnfP21237 Gm27275-201ENSMUST00000184318 272 ntBASIC16.28■□□□□ 0.2
BdnfP21237 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
BdnfP21237 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BdnfP21237 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.28■□□□□ 0.2
BdnfP21237 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BdnfP21237 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BdnfP21237 Dancr-204ENSMUST00000132389 2347 ntBASIC16.28■□□□□ 0.2
BdnfP21237 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BdnfP21237 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BdnfP21237 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.27■□□□□ 0.2
BdnfP21237 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BdnfP21237 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BdnfP21237 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BdnfP21237 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BdnfP21237 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BdnfP21237 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BdnfP21237 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.27■□□□□ 0.2
BdnfP21237 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BdnfP21237 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BdnfP21237 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
BdnfP21237 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.27■□□□□ 0.2
BdnfP21237 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.27■□□□□ 0.2
BdnfP21237 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BdnfP21237 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BdnfP21237 Mir6349-201ENSMUST00000184059 97 ntBASIC16.27■□□□□ 0.2
BdnfP21237 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BdnfP21237 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
BdnfP21237 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BdnfP21237 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
BdnfP21237 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BdnfP21237 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
BdnfP21237 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BdnfP21237 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BdnfP21237 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
BdnfP21237 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BdnfP21237 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BdnfP21237 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BdnfP21237 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
BdnfP21237 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
BdnfP21237 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.26■□□□□ 0.19
BdnfP21237 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
BdnfP21237 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.26■□□□□ 0.19
BdnfP21237 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BdnfP21237 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.26■□□□□ 0.19
BdnfP21237 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
BdnfP21237 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BdnfP21237 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
BdnfP21237 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms