Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Cd48P18181 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd48P18181 Gm11249-201ENSMUST00000117071 859 ntBASIC15.27■□□□□ 0.04
Cd48P18181 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.27■□□□□ 0.04
Cd48P18181 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd48P18181 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cd48P18181 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.27■□□□□ 0.04
Cd48P18181 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd48P18181 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd48P18181 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd48P18181 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd48P18181 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd48P18181 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.27■□□□□ 0.03
Cd48P18181 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd48P18181 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd48P18181 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd48P18181 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cd48P18181 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd48P18181 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cd48P18181 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cd48P18181 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cd48P18181 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd48P18181 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cd48P18181 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Gm18666-201ENSMUST00000190039 958 ntBASIC15.25■□□□□ 0.03
Cd48P18181 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cd48P18181 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.25■□□□□ 0.03
Cd48P18181 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd48P18181 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cd48P18181 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.24■□□□□ 0.03
Cd48P18181 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cd48P18181 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.24■□□□□ 0.03
Cd48P18181 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.24■□□□□ 0.03
Cd48P18181 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.24■□□□□ 0.03
Cd48P18181 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.24■□□□□ 0.03
Cd48P18181 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd48P18181 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd48P18181 Dancr-204ENSMUST00000132389 2347 ntBASIC15.23■□□□□ 0.03
Cd48P18181 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.23■□□□□ 0.03
Cd48P18181 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.23■□□□□ 0.03
Cd48P18181 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Cd48P18181 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd48P18181 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cd48P18181 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd48P18181 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd48P18181 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cd48P18181 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cd48P18181 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.23■□□□□ 0.03
Cd48P18181 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.23■□□□□ 0.03
Cd48P18181 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.23■□□□□ 0.03
Cd48P18181 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd48P18181 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd48P18181 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd48P18181 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cd48P18181 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms