Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmga1P17095 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Hmga1P17095 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmga1P17095 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmga1P17095 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.39■□□□□ 0.37
Hmga1P17095 Gm44450-201ENSMUST00000199528 114 ntBASIC17.39■□□□□ 0.37
Hmga1P17095 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmga1P17095 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmga1P17095 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.39■□□□□ 0.37
Hmga1P17095 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmga1P17095 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Hmga1P17095 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmga1P17095 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmga1P17095 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.39■□□□□ 0.37
Hmga1P17095 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga1P17095 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hmga1P17095 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga1P17095 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.38■□□□□ 0.37
Hmga1P17095 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga1P17095 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.38■□□□□ 0.37
Hmga1P17095 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Hmga1P17095 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hmga1P17095 Gm17807-201ENSMUST00000186869 298 ntBASIC17.38■□□□□ 0.37
Hmga1P17095 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.38■□□□□ 0.37
Hmga1P17095 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga1P17095 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.38■□□□□ 0.37
Hmga1P17095 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga1P17095 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga1P17095 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmga1P17095 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.37■□□□□ 0.37
Hmga1P17095 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.37■□□□□ 0.37
Hmga1P17095 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga1P17095 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga1P17095 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hmga1P17095 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga1P17095 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga1P17095 Olfr129-201ENSMUST00000122318 993 ntBASIC17.37■□□□□ 0.37
Hmga1P17095 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.37■□□□□ 0.37
Hmga1P17095 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga1P17095 Gm28033-201ENSMUST00000184224 96 ntBASIC17.37■□□□□ 0.37
Hmga1P17095 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.37■□□□□ 0.37
Hmga1P17095 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga1P17095 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga1P17095 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hmga1P17095 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.37■□□□□ 0.37
Hmga1P17095 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga1P17095 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga1P17095 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga1P17095 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga1P17095 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga1P17095 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Hmga1P17095 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmga1P17095 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmga1P17095 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmga1P17095 Gm15794-201ENSMUST00000120182 631 ntBASIC17.36■□□□□ 0.37
Hmga1P17095 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmga1P17095 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmga1P17095 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hmga1P17095 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmga1P17095 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmga1P17095 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmga1P17095 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Hmga1P17095 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.36■□□□□ 0.37
Hmga1P17095 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hmga1P17095 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmga1P17095 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.35■□□□□ 0.37
Hmga1P17095 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmga1P17095 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Gm27357-201ENSMUST00000183754 135 ntBASIC17.35■□□□□ 0.37
Hmga1P17095 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hmga1P17095 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.35■□□□□ 0.37
Hmga1P17095 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmga1P17095 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Hmga1P17095 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmga1P17095 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmga1P17095 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmga1P17095 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmga1P17095 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.34■□□□□ 0.37
Hmga1P17095 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmga1P17095 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmga1P17095 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmga1P17095 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hmga1P17095 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmga1P17095 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmga1P17095 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms