Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P06344 Gm13474-201ENSMUST00000122466 815 ntBASIC15.16■□□□□ 0.02
P06344 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P06344 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.16■□□□□ 0.02
P06344 Gm7370-201ENSMUST00000219471 767 ntBASIC15.16■□□□□ 0.02
P06344 Gm18032-201ENSMUST00000222541 538 ntBASIC15.16■□□□□ 0.02
P06344 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
P06344 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P06344 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
P06344 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.16■□□□□ 0.02
P06344 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.15■□□□□ 0.02
P06344 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
P06344 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.15■□□□□ 0.02
P06344 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.15■□□□□ 0.02
P06344 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
P06344 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.15■□□□□ 0.02
P06344 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.15■□□□□ 0.02
P06344 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.15■□□□□ 0.02
P06344 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.15■□□□□ 0.02
P06344 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
P06344 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
P06344 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P06344 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P06344 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
P06344 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P06344 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P06344 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.14■□□□□ 0.01
P06344 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
P06344 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P06344 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.14■□□□□ 0.01
P06344 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P06344 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P06344 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P06344 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P06344 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
P06344 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
P06344 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P06344 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Gm10013-201ENSMUST00000106074 672 ntBASIC15.13■□□□□ 0.01
P06344 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
P06344 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.13■□□□□ 0.01
P06344 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.13■□□□□ 0.01
P06344 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.13■□□□□ 0.01
P06344 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
P06344 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P06344 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
P06344 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.12■□□□□ 0.01
P06344 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.12■□□□□ 0.01
P06344 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
P06344 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.12■□□□□ 0.01
P06344 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.12■□□□□ 0.01
P06344 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Gm18101-201ENSMUST00000215769 548 ntBASIC15.12■□□□□ 0.01
P06344 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.12■□□□□ 0.01
P06344 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
P06344 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P06344 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms