Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vti1aO89116 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vti1aO89116 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vti1aO89116 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vti1aO89116 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vti1aO89116 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vti1aO89116 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vti1aO89116 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vti1aO89116 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vti1aO89116 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vti1aO89116 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vti1aO89116 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vti1aO89116 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.34■□□□□ 0.53
Vti1aO89116 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vti1aO89116 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vti1aO89116 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.34■□□□□ 0.53
Vti1aO89116 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vti1aO89116 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vti1aO89116 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vti1aO89116 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vti1aO89116 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vti1aO89116 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vti1aO89116 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vti1aO89116 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vti1aO89116 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vti1aO89116 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vti1aO89116 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vti1aO89116 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
Vti1aO89116 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Vti1aO89116 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
Vti1aO89116 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Gm17661-201ENSMUST00000170317 270 ntBASIC18.33■□□□□ 0.52
Vti1aO89116 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Vti1aO89116 Gm7370-201ENSMUST00000219471 767 ntBASIC18.33■□□□□ 0.52
Vti1aO89116 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.33■□□□□ 0.52
Vti1aO89116 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vti1aO89116 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.32■□□□□ 0.52
Vti1aO89116 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.32■□□□□ 0.52
Vti1aO89116 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Vti1aO89116 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.32■□□□□ 0.52
Vti1aO89116 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Gm37025-201ENSMUST00000195159 829 ntBASIC18.32■□□□□ 0.52
Vti1aO89116 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Vti1aO89116 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Vti1aO89116 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Vti1aO89116 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vti1aO89116 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vti1aO89116 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Vti1aO89116 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vti1aO89116 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vti1aO89116 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.31■□□□□ 0.52
Vti1aO89116 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.31■□□□□ 0.52
Vti1aO89116 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.31■□□□□ 0.52
Vti1aO89116 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Vti1aO89116 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vti1aO89116 Gm7213-201ENSMUST00000215977 950 ntBASIC18.31■□□□□ 0.52
Vti1aO89116 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vti1aO89116 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vti1aO89116 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Vti1aO89116 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vti1aO89116 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vti1aO89116 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Vti1aO89116 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vti1aO89116 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vti1aO89116 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Vti1aO89116 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vti1aO89116 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vti1aO89116 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vti1aO89116 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vti1aO89116 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms