Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Gm6659-201ENSMUST00000174752 547 ntBASIC15.39■□□□□ 0.05
Abcd4O89016 Gm18101-201ENSMUST00000215769 548 ntBASIC15.39■□□□□ 0.05
Abcd4O89016 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.39■□□□□ 0.05
Abcd4O89016 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abcd4O89016 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abcd4O89016 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Abcd4O89016 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abcd4O89016 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abcd4O89016 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Abcd4O89016 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abcd4O89016 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abcd4O89016 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.39■□□□□ 0.05
Abcd4O89016 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abcd4O89016 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Abcd4O89016 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Abcd4O89016 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abcd4O89016 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Abcd4O89016 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abcd4O89016 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abcd4O89016 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.38■□□□□ 0.05
Abcd4O89016 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abcd4O89016 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abcd4O89016 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Abcd4O89016 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Abcd4O89016 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abcd4O89016 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.38■□□□□ 0.05
Abcd4O89016 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abcd4O89016 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abcd4O89016 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Abcd4O89016 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Abcd4O89016 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Abcd4O89016 Gm16061-201ENSMUST00000122167 857 ntBASIC15.37■□□□□ 0.05
Abcd4O89016 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Abcd4O89016 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.37■□□□□ 0.05
Abcd4O89016 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Abcd4O89016 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Abcd4O89016 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Abcd4O89016 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abcd4O89016 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.37■□□□□ 0.05
Abcd4O89016 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.36■□□□□ 0.05
Abcd4O89016 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Abcd4O89016 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.36■□□□□ 0.05
Abcd4O89016 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Abcd4O89016 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Abcd4O89016 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Abcd4O89016 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Abcd4O89016 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.36■□□□□ 0.05
Abcd4O89016 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Abcd4O89016 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Gm7638-201ENSMUST00000121348 967 ntBASIC15.35■□□□□ 0.05
Abcd4O89016 Gm13474-201ENSMUST00000122466 815 ntBASIC15.35■□□□□ 0.05
Abcd4O89016 Gm23634-201ENSMUST00000175071 91 ntBASIC15.35■□□□□ 0.05
Abcd4O89016 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Abcd4O89016 Gm18032-201ENSMUST00000222541 538 ntBASIC15.35■□□□□ 0.05
Abcd4O89016 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Abcd4O89016 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.35■□□□□ 0.05
Abcd4O89016 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Abcd4O89016 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms