Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Syn1O88935 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Syn1O88935 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Syn1O88935 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.47■□□□□ 0.39
Syn1O88935 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Syn1O88935 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syn1O88935 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Syn1O88935 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syn1O88935 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syn1O88935 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.46■□□□□ 0.39
Syn1O88935 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.46■□□□□ 0.39
Syn1O88935 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Syn1O88935 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.46■□□□□ 0.39
Syn1O88935 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Syn1O88935 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Syn1O88935 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syn1O88935 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syn1O88935 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syn1O88935 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Syn1O88935 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Syn1O88935 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Syn1O88935 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.45■□□□□ 0.38
Syn1O88935 Auts2-212ENSMUST00000178555 309 ntBASIC17.45■□□□□ 0.38
Syn1O88935 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.45■□□□□ 0.38
Syn1O88935 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Syn1O88935 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.45■□□□□ 0.38
Syn1O88935 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.45■□□□□ 0.38
Syn1O88935 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Syn1O88935 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.44■□□□□ 0.38
Syn1O88935 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Fst-202ENSMUST00000223640 2612 ntBASIC17.44■□□□□ 0.38
Syn1O88935 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.44■□□□□ 0.38
Syn1O88935 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Gm5186-201ENSMUST00000218781 920 ntBASIC17.44■□□□□ 0.38
Syn1O88935 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.44■□□□□ 0.38
Syn1O88935 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Syn1O88935 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syn1O88935 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syn1O88935 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Syn1O88935 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.43■□□□□ 0.38
Syn1O88935 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syn1O88935 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syn1O88935 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Syn1O88935 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.43■□□□□ 0.38
Syn1O88935 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syn1O88935 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syn1O88935 Gm14822-201ENSMUST00000122247 291 ntBASIC17.43■□□□□ 0.38
Syn1O88935 Gm12260-201ENSMUST00000122447 411 ntBASIC17.43■□□□□ 0.38
Syn1O88935 Gm27397-201ENSMUST00000184997 107 ntBASIC17.43■□□□□ 0.38
Syn1O88935 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.43■□□□□ 0.38
Syn1O88935 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.43■□□□□ 0.38
Syn1O88935 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.43■□□□□ 0.38
Syn1O88935 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syn1O88935 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syn1O88935 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Syn1O88935 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syn1O88935 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syn1O88935 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Syn1O88935 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syn1O88935 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Syn1O88935 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syn1O88935 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.42■□□□□ 0.38
Syn1O88935 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Syn1O88935 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syn1O88935 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syn1O88935 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syn1O88935 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.42■□□□□ 0.38
Syn1O88935 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Syn1O88935 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syn1O88935 Gm11336-201ENSMUST00000118168 334 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms